Index

_

__cache_state__() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.core.geo_grid.GeoGrid method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.network.Network method) (pyunicorn.core.spatial_network.SpatialNetwork method) (pyunicorn.eventseries.event_series.EventSeries method) (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) __init__() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.climate.map_plot.MapPlot method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method) (pyunicorn.climate.rainfall.RainfallClimateNetwork method) (pyunicorn.climate.spearman.SpearmanClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) (pyunicorn.core.data.Data method) (pyunicorn.core.geo_grid.GeoGrid method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.interacting_networks.InteractingNetworks method) (pyunicorn.core.netcdf_dictionary.NetCDFDictionary method) (pyunicorn.core.network.Network method) (pyunicorn.core.network.NetworkError method) (pyunicorn.core.resistive_network.ResNetwork method) (pyunicorn.core.spatial_network.SpatialNetwork method) (pyunicorn.eventseries.event_series.EventSeries method) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method) (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) (pyunicorn.utils.mpi.MPIException method) __len__() (pyunicorn.core.network.Network method) __rec_cache_state__() (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.spatial_network.SpatialNetwork method) __str__() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method) (pyunicorn.climate.rainfall.RainfallClimateNetwork method) (pyunicorn.climate.spearman.SpearmanClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) (pyunicorn.core.data.Data method) (pyunicorn.core.geo_grid.GeoGrid method) (pyunicorn.core.geo_network.GeoNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.interacting_networks.InteractingNetworks method) (pyunicorn.core.netcdf_dictionary.NetCDFDictionary method) (pyunicorn.core.network.Network method) (pyunicorn.core.network.NetworkError method) (pyunicorn.core.resistive_network.ResNetwork method) (pyunicorn.core.spatial_network.SpatialNetwork method) (pyunicorn.eventseries.event_series.EventSeries method) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method) (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) (pyunicorn.utils.mpi.MPIException method)

__weakref__ (pyunicorn.climate.map_plot.MapPlot attribute) (pyunicorn.core.data.Data attribute) (pyunicorn.core.netcdf_dictionary.NetCDFDictionary attribute) (pyunicorn.core.network.NetworkError attribute) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis attribute) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython attribute) (pyunicorn.timeseries.surrogates.Surrogates attribute) (pyunicorn.utils.mpi.MPIException attribute) _calculate_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) _calculate_correlation() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.partial_correlation.PartialCorrelationClimateNetwork method) (pyunicorn.climate.rainfall.RainfallClimateNetwork method) (pyunicorn.climate.spearman.SpearmanClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) _calculate_correlation_strength() (pyunicorn.climate.havlin.HavlinClimateNetwork method) _calculate_general_average_link_distance() (pyunicorn.core.spatial_network.SpatialNetwork method) _calculate_general_average_path_length() (pyunicorn.core.interacting_networks.InteractingNetworks static method) _calculate_general_closeness() (pyunicorn.core.interacting_networks.InteractingNetworks method) _calculate_general_connectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) _calculate_hilbert_correlation() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) _calculate_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) _calculate_non_local_adjacency() (pyunicorn.climate.climate_network.ClimateNetwork method) _calculate_threshold_adjacency() (pyunicorn.climate.climate_network.ClimateNetwork method) _cum_histogram() (pyunicorn.core.network.Network static method) _cython_calculate_mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) _eca_coincidence_rate() (pyunicorn.eventseries.event_series.EventSeries method) _empirical_percentiles() (pyunicorn.eventseries.event_series.EventSeries method) _get_netcdf_data() (pyunicorn.core.data.Data class method) _histogram() (pyunicorn.core.network.Network static method) _load_data() (pyunicorn.core.data.Data class method) _motif_clustering_helper() (pyunicorn.core.network.Network method) _mut_A (pyunicorn.core.network.Network attribute) _mut_la (pyunicorn.core.network.Network attribute) _mut_nw (pyunicorn.core.network.Network attribute) _mut_window (pyunicorn.climate.climate_data.ClimateData attribute) _ndim_event_coincidence_analysis() (pyunicorn.eventseries.event_series.EventSeries method) _ndim_event_synchronization() (pyunicorn.eventseries.event_series.EventSeries method) _observable (pyunicorn.core.data.Data attribute) _par_corr_to_cmi() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) _quantile_bin_array() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) _regenerate_network() (pyunicorn.climate.climate_network.ClimateNetwork method) _set_directed() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) _set_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method) _set_winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) _symmetrization_antisym() (pyunicorn.eventseries.event_series.EventSeries static method) _symmetrization_directed() (pyunicorn.eventseries.event_series.EventSeries static method) _symmetrization_max() (pyunicorn.eventseries.event_series.EventSeries static method) _symmetrization_mean() (pyunicorn.eventseries.event_series.EventSeries static method) _symmetrization_min() (pyunicorn.eventseries.event_series.EventSeries static method) _symmetrization_symmetric() (pyunicorn.eventseries.event_series.EventSeries static method)

A

AAFT_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) abort() (in module pyunicorn.utils.mpi) adaptive neighborhood size recurrence network recurrence plot adjacency (pyunicorn.core.network.Network property) adjacency_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) adjacency_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) admittance_lapacian() (pyunicorn.core.resistive_network.ResNetwork method) admittive_degree() (pyunicorn.core.resistive_network.ResNetwork method) advanced_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) advanced_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) advanced_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) advanced_local_clustering() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) am_master (in module pyunicorn.utils.mpi) am_slave (in module pyunicorn.utils.mpi) angular_distance() (pyunicorn.core.geo_grid.GeoGrid method) anomaly() (pyunicorn.climate.climate_data.ClimateData method) anomaly_selected_months() (pyunicorn.climate.climate_data.ClimateData method) area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) area_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method)

area_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method) arenas_betweenness() (pyunicorn.core.network.Network method) assigned (in module pyunicorn.utils.mpi) assortativity() (pyunicorn.core.network.Network method) available (in module pyunicorn.utils.mpi) average diagonal line length vertical line length white vertical line length average_cross_closeness() (pyunicorn.core.interacting_networks.InteractingNetworks method) average_diaglength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) average_distance_weighted_path_length() (pyunicorn.core.spatial_network.SpatialNetwork method) average_effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method) average_link_attribute() (pyunicorn.core.network.Network method) average_link_distance() (pyunicorn.core.spatial_network.SpatialNetwork method) average_neighbor_area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) average_neighbors_admittive_degree() (pyunicorn.core.resistive_network.ResNetwork method) average_neighbors_degree() (pyunicorn.core.network.Network method) average_path_length() (pyunicorn.core.network.Network method) average_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) average_white_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)

B

balance() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) BarabasiAlbert() (pyunicorn.core.network.Network static method) BarabasiAlbert_igraph() (pyunicorn.core.network.Network static method) betweenness() (pyunicorn.core.network.Network method) bildegree() (pyunicorn.core.network.Network method) bincount_hist() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method)

bootstrap_distance_matrix() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) boundaries() (pyunicorn.core.geo_grid.GeoGrid method) (pyunicorn.core.grid.Grid method) boundary() (pyunicorn.core.geo_network.GeoNetwork method) boundary_corrected_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) boundary_corrected_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method)

C

calculate_rainfall() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method) calculate_similarity_measure() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) calculate_top_events() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method) clear_cache() (pyunicorn.climate.havlin.HavlinClimateNetwork method) (pyunicorn.climate.hilbert.HilbertClimateNetwork method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.surrogates.Surrogates method) ClimateData (class in pyunicorn.climate.climate_data) ClimateNetwork (class in pyunicorn.climate.climate_network) closeness() (pyunicorn.core.network.Network method) coherence() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) complexity_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) Configuration() (pyunicorn.core.network.Network static method) connectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) convert_lon_coordinates() (pyunicorn.core.geo_grid.GeoGrid method) coord_sequence_from_rect_grid() (pyunicorn.core.geo_grid.GeoGrid static method) (pyunicorn.core.grid.Grid static method) copy() (pyunicorn.core.network.Network method) coreness() (pyunicorn.core.network.Network method) correlated_noise_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) correlatedNoiseSurrogates() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) correlation() (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) correlation_distance() (pyunicorn.climate.climate_network.ClimateNetwork method) correlation_distance_weighted_closeness() (pyunicorn.climate.climate_network.ClimateNetwork method) correlation_lag() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_lag_weighted_average_path_length() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_lag_weighted_closeness() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_strength() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_strength_weighted_average_path_length() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_strength_weighted_closeness() (pyunicorn.climate.havlin.HavlinClimateNetwork method) correlation_weighted_average_path_length() (pyunicorn.climate.tsonis.TsonisClimateNetwork method) correlation_weighted_closeness() (pyunicorn.climate.tsonis.TsonisClimateNetwork method) cos_lat() (pyunicorn.core.geo_grid.GeoGrid method) cos_lon() (pyunicorn.core.geo_grid.GeoGrid method) cos_window() (pyunicorn.core.data.Data static method) CoupledClimateNetwork (class in pyunicorn.climate.coupled_climate_network) CoupledTsonisClimateNetwork (class in pyunicorn.climate.coupled_tsonis) CouplingAnalysis (class in pyunicorn.funcnet.coupling_analysis) CouplingAnalysisPurePython (class in pyunicorn.funcnet.coupling_analysis_pure_python)

CR (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) create_plogp() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) cross recurrence plot RQA cross_adjacency() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_adjacency_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_average_link_distance() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) cross_average_path_length() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_betweenness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_closeness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_correlation() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) cross_degree() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_degree_density() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_global_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_global_clustering_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_global_clustering_xy() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_global_clustering_yx() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_indegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_layer_adjacency() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) cross_link_attribute() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_link_density() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_link_distance() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) cross_local_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_local_clustering_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_outdegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_path_lengths() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_similarity_measure() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) cross_transitivity() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_transitivity_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks method) cross_transitivity_xy() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) cross_transitivity_yx() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) CrossRecurrencePlot (class in pyunicorn.timeseries.cross_recurrence_plot)

D

Data (class in pyunicorn.core.data) data (pyunicorn.climate.havlin.HavlinClimateNetwork attribute) (pyunicorn.climate.hilbert.HilbertClimateNetwork attribute) (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork attribute) (pyunicorn.climate.rainfall.RainfallClimateNetwork attribute) (pyunicorn.climate.tsonis.TsonisClimateNetwork attribute) degree() (pyunicorn.core.network.Network method) degree_cdf() (pyunicorn.core.network.Network method) degree_distribution() (pyunicorn.core.network.Network method) del_link_attribute() (pyunicorn.core.network.Network method) del_node_attribute() (pyunicorn.core.network.Network method) delay embedding determinism RQA determinism() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) diag_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) diagline_dist() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)

diagonal line entropy line length, average line length, frequency distribution line length, maximum lines diameter() (pyunicorn.core.network.Network method) diameter_effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method) directed (pyunicorn.core.network.Network attribute) distance() (pyunicorn.core.geo_grid.GeoGrid method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.spatial_network.SpatialNetwork method) distance_based_measures() (pyunicorn.core.network.Network method) distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) distance_weighted_closeness() (pyunicorn.core.spatial_network.SpatialNetwork method) do_nsi_clustering() (pyunicorn.core.network.Network method) do_nsi_hamming_clustering() (pyunicorn.core.network.Network method) do_nsi_pca_clustering() (pyunicorn.core.network.Network method)

E

edge_betweenness() (pyunicorn.core.network.Network method) edge_current_flow_betweenness() (pyunicorn.core.resistive_network.ResNetwork method) edge_list() (pyunicorn.core.network.Network method) effective_resistance() (pyunicorn.core.resistive_network.ResNetwork method) effective_resistance_closeness_centrality() (pyunicorn.core.resistive_network.ResNetwork method) eigenvector_centrality() (pyunicorn.core.network.Network method) embed_time_series() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) embed_time_series_array() (pyunicorn.timeseries.surrogates.Surrogates method) embedding (pyunicorn.timeseries.recurrence_plot.RecurrencePlot property)

ErdosRenyi() (pyunicorn.core.network.Network static method) euclidean_distance() (pyunicorn.core.grid.Grid method) euclidean_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) eval_fast_code() (pyunicorn.timeseries.surrogates.Surrogates static method) event_analysis_significance() (pyunicorn.eventseries.event_series.EventSeries method) event_coincidence_analysis() (pyunicorn.eventseries.event_series.EventSeries static method) event_series_analysis() (pyunicorn.eventseries.event_series.EventSeries method) event_synchronization() (pyunicorn.eventseries.event_series.EventSeries static method) EventSeries (class in pyunicorn.eventseries.event_series)

F

frequency distribution diagonal line length vertical line length white vertical line length

from_file() (pyunicorn.core.netcdf_dictionary.NetCDFDictionary static method) FromIGraph() (pyunicorn.core.network.Network static method)

G

geographical_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method) geographical_distribution() (pyunicorn.core.geo_network.GeoNetwork method) GeoGrid (class in pyunicorn.core.geo_grid) geometric_distance_distribution() (pyunicorn.core.grid.Grid method) GeoNetwork (class in pyunicorn.core.geo_network) get_admittance() (pyunicorn.core.resistive_network.ResNetwork method) get_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method) get_nearest_neighbors() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) get_next_result() (in module pyunicorn.utils.mpi) get_R() (pyunicorn.core.resistive_network.ResNetwork method) get_result() (in module pyunicorn.utils.mpi) global_admittive_clustering() (pyunicorn.core.resistive_network.ResNetwork method) global_clustering() (pyunicorn.core.network.Network method) global_efficiency() (pyunicorn.core.interacting_networks.InteractingNetworks method) (pyunicorn.core.network.Network method)

graph (pyunicorn.core.network.Network attribute) Grid (class in pyunicorn.core.grid) grid (pyunicorn.core.data.Data attribute) (pyunicorn.core.geo_network.GeoNetwork attribute) (pyunicorn.core.spatial_network.SpatialNetwork attribute) grid() (pyunicorn.core.geo_grid.GeoGrid method) (pyunicorn.core.grid.Grid method) grid_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) grid_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) grid_size() (pyunicorn.core.grid.Grid method) GrowPreferentially() (pyunicorn.core.network.Network static method) GrowPreferentially_old() (pyunicorn.core.network.Network static method) GrowWeights() (pyunicorn.core.network.Network static method)

H

hamming_distance_from() (pyunicorn.core.network.Network method) HavlinClimateNetwork (class in pyunicorn.climate.havlin)

higher_order_transitivity() (pyunicorn.core.network.Network method) HilbertClimateNetwork (class in pyunicorn.climate.hilbert)

I

inarea_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) inarea_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method) inarea_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method) inaverage_link_distance() (pyunicorn.core.spatial_network.SpatialNetwork method) inconnectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) indegree() (pyunicorn.core.network.Network method) indegree_cdf() (pyunicorn.core.network.Network method) indegree_distribution() (pyunicorn.core.network.Network method) indices_selected_months() (pyunicorn.climate.climate_data.ClimateData method) indices_selected_phases() (pyunicorn.climate.climate_data.ClimateData method) info() (in module pyunicorn.utils.mpi) information_transfer() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) inter_system_recurrence_matrix() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) InteractingNetworks (class in pyunicorn.core.interacting_networks) internal_adjacency() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_average_path_length() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_betweenness() (pyunicorn.core.interacting_networks.InteractingNetworks method)

internal_betweenness_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) internal_betweenness_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) internal_closeness() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_degree() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_global_clustering() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_indegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_link_attribute() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_link_density() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_outdegree() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_path_lengths() (pyunicorn.core.interacting_networks.InteractingNetworks method) internal_recurrence_rates() (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) interregional_betweenness() (pyunicorn.core.network.Network method) InterSystemRecurrenceNetwork (class in pyunicorn.timeseries.inter_system_recurrence_network) intotal_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) inv_correlation_distance() (pyunicorn.climate.climate_network.ClimateNetwork method)

J

joint recurrence plot RQA

JointRecurrenceNetwork (class in pyunicorn.timeseries.joint_recurrence_network) JointRecurrencePlot (class in pyunicorn.timeseries.joint_recurrence_plot) JR (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

L

lag (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute) laminarity laminarity() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) laplacian() (pyunicorn.core.network.Network method) lat_sequence() (pyunicorn.core.geo_grid.GeoGrid method) legendre_coordinates() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) line entropy diagonal vertical white vertical line length average diagonal average vertical average white vertical frequency distribution diagonal frequency distribution vertical frequency distribution white vertical maximum diagonal maximum vertical maximum white vertical lines diagonal vertical white vertical link_attribute() (pyunicorn.core.network.Network method) link_betweenness() (pyunicorn.core.network.Network method) link_density (pyunicorn.core.network.Network attribute)

link_density_function() (pyunicorn.climate.climate_network.ClimateNetwork method) link_distance_distribution() (pyunicorn.core.spatial_network.SpatialNetwork method) Load() (pyunicorn.climate.climate_data.ClimateData class method) (pyunicorn.climate.climate_network.ClimateNetwork static method) (pyunicorn.core.data.Data class method) (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.grid.Grid static method) (pyunicorn.core.network.Network static method) (pyunicorn.core.spatial_network.SpatialNetwork static method) LoadTXT() (pyunicorn.core.geo_grid.GeoGrid static method) local_admittive_clustering() (pyunicorn.core.resistive_network.ResNetwork method) local_cliquishness() (pyunicorn.core.network.Network method) local_clustering() (pyunicorn.core.network.Network method) local_clustering_dim_single_scale() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) local_correlation_distance_weighted_vulnerability() (pyunicorn.climate.climate_network.ClimateNetwork method) local_correlation_lag_weighted_vulnerability() (pyunicorn.climate.havlin.HavlinClimateNetwork method) local_correlation_strength_weighted_vulnerability() (pyunicorn.climate.havlin.HavlinClimateNetwork method) local_correlation_weighted_vulnerability() (pyunicorn.climate.tsonis.TsonisClimateNetwork method) local_cyclemotif_clustering() (pyunicorn.core.network.Network method) local_distance_weighted_vulnerability() (pyunicorn.core.spatial_network.SpatialNetwork method) local_efficiency() (pyunicorn.core.interacting_networks.InteractingNetworks method) local_geographical_clustering() (pyunicorn.core.geo_network.GeoNetwork method) local_inmotif_clustering() (pyunicorn.core.network.Network method) local_midmotif_clustering() (pyunicorn.core.network.Network method) local_mutual_information_weighted_vulnerability() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) local_outmotif_clustering() (pyunicorn.core.network.Network method) local_vulnerability() (pyunicorn.core.network.Network method) lon_sequence() (pyunicorn.core.geo_grid.GeoGrid method)

M

M (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) make_event_matrix() (pyunicorn.eventseries.event_series.EventSeries static method) manhattan_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) MapPlot (class in pyunicorn.climate.map_plot) matching_index() (pyunicorn.core.network.Network method) max_diaglength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) max_link_distance() (pyunicorn.core.spatial_network.SpatialNetwork method) max_neighbor_area_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) max_neighbors_degree() (pyunicorn.core.network.Network method) max_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) max_white_vertlength() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) maximum diagonal line length vertical line length white vertical line length mean recurrence time mean_node_weight (pyunicorn.core.network.Network attribute) mean_recurrence_time() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) metric (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) mi_file (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork attribute) missing_values (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute) Model() (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.network.Network static method) (pyunicorn.core.spatial_network.SpatialNetwork static method) module pyunicorn.climate.climate_data pyunicorn.climate.climate_network pyunicorn.climate.coupled_climate_network pyunicorn.climate.coupled_tsonis pyunicorn.climate.havlin pyunicorn.climate.hilbert pyunicorn.climate.map_plot pyunicorn.climate.mutual_info pyunicorn.climate.partial_correlation pyunicorn.climate.rainfall pyunicorn.climate.spearman pyunicorn.climate.tsonis pyunicorn.core.data pyunicorn.core.geo_grid pyunicorn.core.geo_network pyunicorn.core.grid pyunicorn.core.interacting_networks pyunicorn.core.netcdf_dictionary pyunicorn.core.network pyunicorn.core.resistive_network pyunicorn.core.spatial_network pyunicorn.eventseries.event_series pyunicorn.funcnet.coupling_analysis pyunicorn.funcnet.coupling_analysis_pure_python pyunicorn.timeseries.cross_recurrence_plot pyunicorn.timeseries.inter_system_recurrence_network pyunicorn.timeseries.joint_recurrence_network pyunicorn.timeseries.joint_recurrence_plot pyunicorn.timeseries.recurrence_network pyunicorn.timeseries.recurrence_plot pyunicorn.timeseries.surrogates pyunicorn.timeseries.visibility_graph pyunicorn.utils.mpi

MPIException msf_synchronizability() (pyunicorn.core.network.Network method) mutual_information() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method) (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) mutual_information_edges() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) mutual_information_weighted_average_path_length() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) mutual_information_weighted_closeness() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) MutualInfoClimateNetwork (class in pyunicorn.climate.mutual_info)

N

N (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) (pyunicorn.core.grid.Grid attribute) (pyunicorn.core.network.Network attribute) (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) N_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) N_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) n_grid_points (pyunicorn.core.grid.Grid attribute) n_links (pyunicorn.core.network.Network attribute) n_processed (in module pyunicorn.utils.mpi) n_slaves (in module pyunicorn.utils.mpi) N_x (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) N_y (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) NetCDFDictionary (class in pyunicorn.core.netcdf_dictionary) Network (class in pyunicorn.core.network) network_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) network_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) NetworkError newman_betweenness() (pyunicorn.core.network.Network method) next_power_2() (pyunicorn.core.data.Data static method) node_attribute() (pyunicorn.core.network.Network method) node_coordinates() (pyunicorn.core.grid.Grid method) node_number() (pyunicorn.core.geo_grid.GeoGrid method) (pyunicorn.core.grid.Grid method) node_weights (pyunicorn.core.network.Network property) nodes_1 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) nodes_2 (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork attribute) non_local() (pyunicorn.climate.climate_network.ClimateNetwork method) normalize time series time series array, [1] normalize_time_series() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) normalize_time_series_array() (pyunicorn.core.data.Data static method) (pyunicorn.timeseries.surrogates.Surrogates static method) nsi_arenas_betweenness() (pyunicorn.core.network.Network method) nsi_average_neighbors_degree() (pyunicorn.core.network.Network method) nsi_average_path_length() (pyunicorn.core.network.Network method) nsi_betweenness() (pyunicorn.core.network.Network method) nsi_bildegree() (pyunicorn.core.network.Network method)

nsi_closeness() (pyunicorn.core.network.Network method) nsi_connected_hamming_cluster_tree() (pyunicorn.core.geo_network.GeoNetwork method) nsi_cross_average_path_length() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_betweenness() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_closeness_centrality() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_edge_density() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_global_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_local_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_mean_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_cross_transitivity() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_degree() (pyunicorn.core.network.Network method) nsi_degree_cumulative_histogram() (pyunicorn.core.network.Network method) nsi_degree_histogram() (pyunicorn.core.network.Network method) nsi_eigenvector_centrality() (pyunicorn.core.network.Network method) nsi_exponential_closeness() (pyunicorn.core.network.Network method) nsi_global_clustering() (pyunicorn.core.network.Network method) nsi_global_efficiency() (pyunicorn.core.network.Network method) nsi_harmonic_closeness() (pyunicorn.core.network.Network method) nsi_indegree() (pyunicorn.core.network.Network method) nsi_internal_closeness_centrality() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_internal_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_internal_local_clustering() (pyunicorn.core.interacting_networks.InteractingNetworks method) nsi_interregional_betweenness() (pyunicorn.core.network.Network method) nsi_laplacian() (pyunicorn.core.network.Network method) nsi_local_clustering() (pyunicorn.core.network.Network method) nsi_local_cyclemotif_clustering() (pyunicorn.core.network.Network method) nsi_local_inmotif_clustering() (pyunicorn.core.network.Network method) nsi_local_midmotif_clustering() (pyunicorn.core.network.Network method) nsi_local_outmotif_clustering() (pyunicorn.core.network.Network method) nsi_local_soffer_clustering() (pyunicorn.core.network.Network method) nsi_max_neighbors_degree() (pyunicorn.core.network.Network method) nsi_newman_betweenness() (pyunicorn.core.network.Network method) nsi_outdegree() (pyunicorn.core.network.Network method) nsi_spreading() (pyunicorn.core.network.Network method) nsi_transitivity() (pyunicorn.core.network.Network method) nsi_twinness() (pyunicorn.core.network.Network method) number_cross_layer_links() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) number_cross_links() (pyunicorn.core.interacting_networks.InteractingNetworks method) number_internal_links() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) (pyunicorn.core.interacting_networks.InteractingNetworks method) nz_coords() (in module pyunicorn.core.network)

O

observable() (pyunicorn.core.data.Data method) observable_long_name (pyunicorn.core.data.Data attribute) observable_name (pyunicorn.core.data.Data attribute) original_data (pyunicorn.timeseries.surrogates.Surrogates attribute) original_distribution() (pyunicorn.timeseries.surrogates.Surrogates method) outarea_weighted_connectivity() (pyunicorn.core.geo_network.GeoNetwork method) outarea_weighted_connectivity_cumulative_distribution() (pyunicorn.core.geo_network.GeoNetwork method)

outarea_weighted_connectivity_distribution() (pyunicorn.core.geo_network.GeoNetwork method) outaverage_link_distance() (pyunicorn.core.spatial_network.SpatialNetwork method) outconnectivity_weighted_distance() (pyunicorn.core.geo_network.GeoNetwork method) outdegree() (pyunicorn.core.network.Network method) outdegree_cdf() (pyunicorn.core.network.Network method) outdegree_distribution() (pyunicorn.core.network.Network method) outtotal_link_distance() (pyunicorn.core.geo_network.GeoNetwork method)

P

pagerank() (pyunicorn.core.network.Network method) PartialCorrelationClimateNetwork (class in pyunicorn.climate.partial_correlation) path_lengths() (pyunicorn.core.network.Network method) path_lengths_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) path_lengths_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) permutation_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) permuted_copy() (pyunicorn.core.network.Network method) phase_indices() (pyunicorn.climate.climate_data.ClimateData method) phase_mean() (pyunicorn.climate.climate_data.ClimateData method) phase_shift() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) plot() (pyunicorn.climate.map_plot.MapPlot method) print_boundaries() (pyunicorn.core.geo_grid.GeoGrid method) print_data_info() (pyunicorn.core.data.Data method) print_grid_size() (pyunicorn.core.grid.Grid method) pyunicorn.climate.climate_data module pyunicorn.climate.climate_network module pyunicorn.climate.coupled_climate_network module pyunicorn.climate.coupled_tsonis module pyunicorn.climate.havlin module pyunicorn.climate.hilbert module pyunicorn.climate.map_plot module pyunicorn.climate.mutual_info module pyunicorn.climate.partial_correlation module pyunicorn.climate.rainfall module pyunicorn.climate.spearman module pyunicorn.climate.tsonis module pyunicorn.core.data module

pyunicorn.core.geo_grid module pyunicorn.core.geo_network module pyunicorn.core.grid module pyunicorn.core.interacting_networks module pyunicorn.core.netcdf_dictionary module pyunicorn.core.network module pyunicorn.core.resistive_network module pyunicorn.core.spatial_network module pyunicorn.eventseries.event_series module pyunicorn.funcnet.coupling_analysis module pyunicorn.funcnet.coupling_analysis_pure_python module pyunicorn.timeseries.cross_recurrence_plot module pyunicorn.timeseries.inter_system_recurrence_network module pyunicorn.timeseries.joint_recurrence_network module pyunicorn.timeseries.joint_recurrence_plot module pyunicorn.timeseries.recurrence_network module pyunicorn.timeseries.recurrence_plot module pyunicorn.timeseries.surrogates module pyunicorn.timeseries.visibility_graph module pyunicorn.utils.mpi module

Q

queue (in module pyunicorn.utils.mpi)

R

R (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) r() (in module pyunicorn.core.network) RainfallClimateNetwork (class in pyunicorn.climate.rainfall) randomly_rewire() (pyunicorn.core.network.Network method) randomly_rewire_geomodel_I() (pyunicorn.core.spatial_network.SpatialNetwork method) randomly_rewire_geomodel_II() (pyunicorn.core.spatial_network.SpatialNetwork method) randomly_rewire_geomodel_III() (pyunicorn.core.spatial_network.SpatialNetwork method) RandomlyRewireCrossLinks() (pyunicorn.core.interacting_networks.InteractingNetworks static method) RandomlySetCrossLinks() (pyunicorn.core.interacting_networks.InteractingNetworks static method) RandomlySetCrossLinks_sparse() (pyunicorn.core.interacting_networks.InteractingNetworks static method) rank (in module pyunicorn.utils.mpi) rank_time_series() (pyunicorn.climate.rainfall.RainfallClimateNetwork static method) (pyunicorn.climate.spearman.SpearmanClimateNetwork static method) recurrence plot RQA time series twins recurrence rate recurrence_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) recurrence_plot() (pyunicorn.timeseries.surrogates.Surrogates method) recurrence_probability() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method)

RecurrenceNetwork (class in pyunicorn.timeseries.recurrence_network) RecurrencePlot (class in pyunicorn.timeseries.recurrence_plot) refined_AAFT_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) region() (pyunicorn.core.geo_grid.GeoGrid static method) region_indices() (pyunicorn.core.geo_grid.GeoGrid method) RegularGrid() (pyunicorn.core.geo_grid.GeoGrid static method) (pyunicorn.core.grid.Grid static method) rejection_sampling() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) resample_diagline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) resample_vertline_dist() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) rescale() (pyunicorn.core.data.Data static method) ResNetwork (class in pyunicorn.core.resistive_network) results (in module pyunicorn.utils.mpi) retarded_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) retarded_closeness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) retarded_degree() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) retarded_local_clustering() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) RQA cross recurrence plot determinism joint recurrence plot recurrence plot rqa_summary() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) rr() (in module pyunicorn.core.network) run() (in module pyunicorn.utils.mpi)

S

save() (pyunicorn.climate.climate_network.ClimateNetwork method) (pyunicorn.core.grid.Grid method) (pyunicorn.core.network.Network method) (pyunicorn.core.spatial_network.SpatialNetwork method) save_for_cgv() (pyunicorn.core.geo_network.GeoNetwork method) save_txt() (pyunicorn.core.geo_grid.GeoGrid method) sequence() (pyunicorn.core.grid.Grid method) set_adaptive_neighborhood_size() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_directed() (pyunicorn.climate.hilbert.HilbertClimateNetwork method) set_edge_list() (pyunicorn.core.network.Network method) set_fixed_local_recurrence_rate() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_fixed_recurrence_rate() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_fixed_threshold() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_fixed_threshold_std() (pyunicorn.timeseries.joint_recurrence_network.JointRecurrenceNetwork method) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot method) (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) set_global_window() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.core.data.Data method) set_link_attribute() (pyunicorn.core.network.Network method) set_link_density() (pyunicorn.climate.climate_network.ClimateNetwork method) set_max_delay() (pyunicorn.climate.havlin.HavlinClimateNetwork method) set_node_attribute() (pyunicorn.core.network.Network method) set_node_weight_type() (pyunicorn.core.geo_network.GeoNetwork method) set_non_local() (pyunicorn.climate.climate_network.ClimateNetwork method) set_random_links_by_distance() (pyunicorn.core.spatial_network.SpatialNetwork method) set_silence_level() (pyunicorn.core.data.Data method) set_threshold() (pyunicorn.climate.climate_network.ClimateNetwork method) set_window() (pyunicorn.climate.climate_data.ClimateData method) (pyunicorn.core.data.Data method) set_winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method) shuffled_anomaly() (pyunicorn.climate.climate_data.ClimateData method) shuffled_by_distance_copy() (pyunicorn.core.geo_network.GeoNetwork method) shuffled_surrogate_for_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) shuffled_surrogate_for_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) silence_level (pyunicorn.climate.coupled_tsonis.CoupledTsonisClimateNetwork attribute) (pyunicorn.core.data.Data attribute) (pyunicorn.core.grid.Grid attribute) (pyunicorn.core.netcdf_dictionary.NetCDFDictionary attribute) (pyunicorn.core.network.Network attribute) (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) (pyunicorn.timeseries.surrogates.Surrogates attribute) (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute)

similarity_measure() (pyunicorn.climate.climate_network.ClimateNetwork method) similarity_measure_1() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) similarity_measure_2() (pyunicorn.climate.coupled_climate_network.CoupledClimateNetwork method) sin_lat() (pyunicorn.core.geo_grid.GeoGrid method) sin_lon() (pyunicorn.core.geo_grid.GeoGrid method) size (in module pyunicorn.utils.mpi) slave_queue (in module pyunicorn.utils.mpi) SmallComplexNetwork() (pyunicorn.core.resistive_network.ResNetwork static method) SmallDirectedTestNetwork() (pyunicorn.core.interacting_networks.InteractingNetworks static method) (pyunicorn.core.network.Network static method) SmallTestData() (pyunicorn.climate.climate_data.ClimateData static method) (pyunicorn.core.data.Data static method) (pyunicorn.timeseries.surrogates.Surrogates static method) SmallTestGrid() (pyunicorn.core.geo_grid.GeoGrid static method) (pyunicorn.core.grid.Grid static method) SmallTestNetwork() (pyunicorn.climate.climate_network.ClimateNetwork static method) (pyunicorn.climate.tsonis.TsonisClimateNetwork static method) (pyunicorn.core.geo_network.GeoNetwork static method) (pyunicorn.core.interacting_networks.InteractingNetworks static method) (pyunicorn.core.network.Network static method) (pyunicorn.core.resistive_network.ResNetwork static method) (pyunicorn.core.spatial_network.SpatialNetwork static method) sp_A (pyunicorn.core.network.Network attribute) sp_Aplus() (pyunicorn.core.network.Network method) sp_diag_sqrt_w() (pyunicorn.core.network.Network method) sp_diag_w() (pyunicorn.core.network.Network method) sp_diag_w_inv() (pyunicorn.core.network.Network method) sp_nsi_diag_k() (pyunicorn.core.network.Network method) sp_nsi_diag_k_inv() (pyunicorn.core.network.Network method) sparse_rqa (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) SpatialNetwork (class in pyunicorn.core.spatial_network) spatio-temporal window, [1] spearman_corr() (pyunicorn.climate.rainfall.RainfallClimateNetwork method) SpearmanClimateNetwork (class in pyunicorn.climate.spearman) splitted_copy() (pyunicorn.core.network.Network method) spreading() (pyunicorn.core.network.Network method) start_time (in module pyunicorn.utils.mpi) stats (in module pyunicorn.utils.mpi) submit_call() (in module pyunicorn.utils.mpi) subnetwork() (pyunicorn.core.interacting_networks.InteractingNetworks method) supremum_distance_matrix() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) surrogates twins Surrogates (class in pyunicorn.timeseries.surrogates) symmetrize_by_absmax() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis method)

T

terminate() (in module pyunicorn.utils.mpi) test_data() (pyunicorn.funcnet.coupling_analysis.CouplingAnalysis static method) test_mutual_information() (pyunicorn.timeseries.surrogates.Surrogates static method) test_pearson_correlation() (pyunicorn.timeseries.surrogates.Surrogates static method) test_threshold_significance() (pyunicorn.timeseries.surrogates.Surrogates method) threshold() (pyunicorn.climate.climate_network.ClimateNetwork method) threshold_from_link_density() (pyunicorn.climate.climate_network.ClimateNetwork method) threshold_from_recurrence_rate threshold_from_recurrence_rate() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) threshold_from_recurrence_rate_fast() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot static method) time series recurrence plot time series normalize time series array normalize, [1] time_cycle (pyunicorn.climate.climate_data.ClimateData attribute) time_series (pyunicorn.timeseries.recurrence_plot.RecurrencePlot attribute) (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute) time_surrogate_for_cc() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method) time_surrogate_for_mi() (pyunicorn.funcnet.coupling_analysis_pure_python.CouplingAnalysisPurePython method)

timings (pyunicorn.timeseries.visibility_graph.VisibilityGraph attribute) to_file() (pyunicorn.core.netcdf_dictionary.NetCDFDictionary method) total_cross_degree() (pyunicorn.core.interacting_networks.InteractingNetworks method) total_link_distance() (pyunicorn.core.geo_network.GeoNetwork method) total_node_weight (pyunicorn.core.network.Network attribute) total_time (in module pyunicorn.utils.mpi) total_time_est (in module pyunicorn.utils.mpi) trans_betweenness() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) transitivity() (pyunicorn.core.network.Network method) transitivity_dim_single_scale() (pyunicorn.timeseries.recurrence_network.RecurrenceNetwork method) trapping time trapping_time() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) TsonisClimateNetwork (class in pyunicorn.climate.tsonis) twin surrogate twin_surrogates() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method) twins recurrence plot surrogates twins() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) (pyunicorn.timeseries.surrogates.Surrogates method)

U

undirected_adjacency() (pyunicorn.core.network.Network method) undirected_copy() (pyunicorn.core.network.Network method)

update_admittance() (pyunicorn.core.resistive_network.ResNetwork method) update_R() (pyunicorn.core.resistive_network.ResNetwork method) update_resistances() (pyunicorn.core.resistive_network.ResNetwork method)

V

vert_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) vertex_current_flow_betweenness() (pyunicorn.core.resistive_network.ResNetwork method) vertical line entropy line length, average line length, frequency distribution line length, maximum lines

vertline_dist() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) visibility() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_relations() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_relations_horizontal() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) visibility_single() (pyunicorn.timeseries.visibility_graph.VisibilityGraph method) VisibilityGraph (class in pyunicorn.timeseries.visibility_graph)

W

WattsStrogatz() (pyunicorn.core.network.Network static method) weighted_local_clustering() (pyunicorn.core.network.Network static method) white vertical line entropy line length, average line length, frequency distribution line length, maximum lines

white_noise_surrogates() (pyunicorn.timeseries.surrogates.Surrogates method) white_vert_entropy() (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) white_vertline_dist() (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot method) (pyunicorn.timeseries.recurrence_plot.RecurrencePlot method) window() (pyunicorn.core.data.Data method) winter_only() (pyunicorn.climate.mutual_info.MutualInfoClimateNetwork method) (pyunicorn.climate.tsonis.TsonisClimateNetwork method)

X

x (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

x_embedded (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot property) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

Y

y (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot attribute) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

y_embedded (pyunicorn.timeseries.cross_recurrence_plot.CrossRecurrencePlot property) (pyunicorn.timeseries.inter_system_recurrence_network.InterSystemRecurrenceNetwork attribute) (pyunicorn.timeseries.joint_recurrence_plot.JointRecurrencePlot attribute)

Z

zero padded data

zero_pad_data() (pyunicorn.core.data.Data static method)